MADGAON railway station's abbreviated code is MAO. There are approximately 106 trains which depart or passes through MADGAON. Below you will see the list of trains with their arrival and departure timing from MADGAON.
| Train Number | Train Name | Run On | Classes | Schedule Arrival | Schedule Departure |
| 12978 | MARU SAGAR EXP | FRI | 1A | SL | 3A | 2A | 13:10 | 13:20 |
| 12449 | GOA SMPRK K EXP | TUE | WED | SL | 3A | 1A | SOURCE | 10:00 |
| 12450 | GOA SMPRK KRANTI EXP | MON | SAT | SL | 2A | 14:45 | DEST |
| 12484 | KCVL EXPRESS | SUN | SL | 2A | 22:25 | 22:35 |
| 10103 | MANDOVI EXPRESS | MON | TUE | WED | THU | FRI | SAT | SUN | 1A | 2A | 3A | SL | 2S | 18:45 | DEST |
| 10215 | MAO ERS | SUN | 3A | SL | 1A | 2A | SOURCE | 21:00 |
| 10104 | MANDOVI EXPRESS | MON | TUE | WED | THU | FRI | SAT | SUN | SL | 2A | 3A | 2S | 1A | SOURCE | 09:15 |
| 10112 | KONKAN KANYA EXP | MON | TUE | WED | THU | FRI | SAT | SUN | 1A | 2A | 3A | SL | SOURCE | 18:00 |
| 10216 | ERS MAO SPL | MON | SL | 2A | 1A | 3A | 03:30 | DEST |
| 11085 | LTT MAO DOUBLE DECKER EXP | WED | FRI | SUN | CC | 18:00 | DEST |
| 11086 | MAO LTT DOUBLE DECKER EXP | MON | THU | SAT | CC | SOURCE | 06:00 |
| 11097 | POORNA EXPRESS | SAT | 2A | 3A | SL | 16:50 | 17:10 |
| 11098 | POORNA EXPRESS | MON | 3A | 2A | SL | 13:40 | 14:25 |
| 12431 | TVC NZM RAJDHANI EXP | TUE | THU | FRI | 1A | 3A | 2A | 10:55 | 11:05 |
| 12218 | KERALA S.KRANTI EXP | WED | FRI | 1A | 2A | 3A | SL | 22:25 | 22:35 |
| 12223 | LTT ERS DURONTO EXPRESS | TUE | SAT | 3A | 2A | 1A | 07:10 | 07:20 |
| 12224 | ERS LTT DURONTO EXPRESS | WED | SUN | 1A | 2A | 3A | 12:35 | 12:45 |
| 12283 | ERS NZM DURONTO EXPRESS | TUE | 3A | SL | 1A | 12:35 | 12:45 |
| 12284 | NZM ERS DURONTO EXPRESS | SAT | 3A | SL | 1A | 2A | 04:25 | 04:35 |
| 12133 | CSMT MAJN EXPRESS | MON | TUE | WED | THU | FRI | SAT | SUN | 2A | 3A | SL | 08:50 | 09:00 |
| 12134 | MAJN CSMT EXPRESS | MON | TUE | WED | THU | FRI | SAT | SUN | SL | 2A | 3A | 21:40 | 21:50 |
| 12201 | KCVL GARIB RATH | MON | FRI | 3A | CC | 04:25 | 04:35 |
| 12202 | LTT GARIB RATH | THU | SUN | 3A | CC | 02:10 | 02:20 |
| 12217 | KERALA S.KRANTI EXP | MON | SAT | 2A | SL | 3A | 1A | 01:20 | 01:30 |
| 12779 | GOA EXPRESS | MON | TUE | WED | THU | FRI | SAT | SUN | 3A | 15:45 | 15:50 |
| 12051 | JAN SHATABDI EXPRESS | MON | TUE | WED | THU | FRI | SAT | SUN | CC | 2S | 14:05 | DEST |
| 12052 | MAO DR JAN SHB EXP | MON | TUE | WED | THU | FRI | SAT | SUN | 2S | CC | SOURCE | 14:30 |
| 12741 | VSG PNBE EXP | WED | 2A | 3A | SL | 18:40 | 19:00 |
| 12742 | PNBE VSG EXP | SAT | 2A | 3A | SL | 07:50 | 08:20 |
| 12617 | MANGALA LDWEEP | MON | TUE | WED | THU | FRI | SAT | SUN | 2A | SL | 3A | 03:00 | 03:10 |
| 12618 | MNGLA LKSDP EXP | MON | TUE | WED | THU | FRI | SAT | SUN | 3A | 2A | SL | 20:30 | 20:40 |
| 12619 | MATSYAGANDHA EXP | MON | TUE | WED | THU | FRI | SAT | SUN | 3A | 2A | SL | 01:25 | 01:35 |
| 12620 | MATSYAGANDA EXP | MON | TUE | WED | THU | FRI | SAT | SUN | SL | 2A | 19:05 | 19:15 |
| 70103 | PERN MAO KAWR DEMU | MON | TUE | WED | THU | FRI | SAT | [] | 11:35 | 11:40 |
| 70105 | MAO MAQ DEMU | MON | TUE | WED | THU | FRI | SAT | [] | SOURCE | 05:00 |
| 70106 | MAQ MAO DEMU | MON | TUE | WED | THU | FRI | SAT | [] | 22:30 | DEST |
| 70101 | PERN MAO KAWR DEMU | MON | TUE | WED | THU | FRI | SAT | SUN | [] | 19:08 | 19:10 |
| 70102 | KAWR MAO PERN DEMU | MON | TUE | WED | THU | FRI | SAT | SUN | [] | 07:04 | 07:06 |
| 10111 | KONKAN KANYA EX | MON | TUE | WED | THU | FRI | SAT | SUN | SL | 1A | 2A | 3A | 10:45 | DEST |
| 12977 | MARU SAGAR EXP | SUN | SL | 11:10 | 11:20 |
| 12780 | GOA EXPRESS | MON | TUE | WED | THU | FRI | SAT | SUN | 2A | SL | 3A | 05:40 | 05:45 |
| 22413 | MAO NZM RAJDHANI EXPRESS | MON | SUN | 1A | 3A | 2A | SOURCE | 10:00 |
| 22476 | CBE BKN AC SF EXP | SAT | 2A | 1A | 3A | 04:05 | 04:15 |
| 18047 | HWH VSGAMARAVATHI EXPRESS | MON | TUE | THU | SAT | 2A | 3A | SL | 13:55 | 14:00 |
| 18048 | VSG HWH AMARAVATI EXPRESS | TUE | THU | FRI | SUN | 3A | 2A | SL | 07:40 | 07:45 |
| 16346 | NETRAVATHI EXP | MON | TUE | WED | THU | FRI | SAT | SUN | 2A | 3A | SL | 04:35 | 04:45 |
| 22114 | KCVL LTT BI WEEKLY SF EXP | MON | THU | 1A | 2A | 3A | SL | 18:25 | 18:35 |
| 17315 | VSG VLNK EXPRESS | MON | 2A | SL | 09:30 | 09:35 |
| 17419 | TPTY VSG | THU | 2A | 3A | SL | 05:15 | 05:20 |
| 22630 | TEN DR EXPRESS | WED | 2A | SL | 3A | 04:05 | 04:15 |
| 19259 | KCVL BVC EXPRESS | THU | 2A | SL | 11:30 | 11:40 |
| 19260 | BVC KCVL EXP | SUN | 3A | SL | 07:25 | 07:35 |
| 19262 | KOCHUVELI EXP | THU | 2A | 3A | 21:00 | 21:10 |
| 19577 | JAMNAGAR EXP | MON | TUE | SL | 2A | 3A | 03:50 | 04:00 |
| 50102 | MADGAON RATNAGIRI | MON | TUE | WED | THU | FRI | SAT | SUN | [] | SOURCE | 20:00 |
| 56641 | MAO MAQ PASS | MON | TUE | WED | THU | FRI | SAT | SUN | 2S | SOURCE | 14:00 |
| 56640 | MAQ MAO PASSENGER | MON | TUE | WED | THU | FRI | SAT | SUN | 2S | 13:30 | DEST |
| 22907 | MAO HAPA SUP EXP | FRI | 3A | SL | 2A | SOURCE | 07:00 |
| 56962 | VSG QLM PASSR | MON | TUE | WED | THU | FRI | SAT | SUN | [] | 08:14 | 08:15 |
| 56965 | QLM VSG | MON | TUE | WED | THU | FRI | SAT | SUN | [] | 18:08 | 18:10 |
| 22475 | BKN CBE AC S F | THU | 3A | 1A | 2A | 13:10 | 13:20 |
| 19578 | JAM TEN EXPRESS | FRI | SAT | SL | 3A | 2A | 23:48 | 23:58 |
| 16311 | BKN KCVL EXPRES | TUE | SL | 2A | 3A | 09:20 | 09:30 |
| 16338 | HAPA EXPRESS | WED | FRI | 3A | SL | 2A | 11:30 | 11:40 |
| 22113 | LTT KCVL BI WEEKLY EXP | TUE | SAT | 1A | SL | 2A | 3A | 02:15 | 02:25 |
| 17312 | VSG CHENNAI EXP | THU | 3A | 2A | 15:18 | 15:20 |
| 17316 | VLNK VSG EXPRESS | TUE | 3A | SL | 2A | 05:15 | 05:20 |
| 22633 | NIZAMUDDIN EXP | WED | SL | 3A | 08:15 | 08:25 |
| 22655 | TVC NZM WKLY SF EXP | WED | SL | 2A | 18:25 | 18:35 |
| 50107 | SWV MAO PASSENGER | MON | TUE | WED | THU | FRI | SAT | SUN | [] | 20:30 | DEST |
| 56964 | VSG QLM | MON | TUE | WED | THU | FRI | SAT | SUN | [] | 13:46 | 13:47 |
| 70104 | KAWR MAO PERN DEMU | MON | TUE | WED | THU | FRI | SAT | [] | 15:32 | 15:34 |
| 50101 | RATNAGIRI MADGAON | MON | TUE | WED | THU | FRI | SAT | SUN | [] | 09:40 | DEST |
| 19331 | KCVL INDORE EXP | FRI | 2A | SL | 3A | 04:05 | 04:15 |
| 22654 | NZM TVC WKLY SF EXP | MON | 3A | 1A | SL | 2A | 18:40 | 18:50 |
| 22149 | ERS PUNE SF EXPRESS | TUE | FRI | SL | 3A | 18:25 | 18:35 |
| 22150 | PUNE ERS SF EXPRESS | WED | SUN | SL | 05:45 | 05:55 |
| 16312 | KCVL BKN EXPRESS | SAT | 2A | 3A | 11:30 | 11:40 |
| 16336 | GANDHIDHAM EXP | TUE | 2A | 3A | SL | 11:20 | 11:30 |
| 17309 | YPR VASCO EXP | TUE | SUN | 2A | 05:15 | 05:20 |
| 17310 | YPR VASCO EXPRESS | MON | SAT | 2A | SL | 3A | 21:20 | 21:25 |
| 22634 | NZM TVC SF EXP | FRI | 1A | SL | 3A | 2A | 08:55 | 09:05 |
| 22636 | MAQ MAO SF INTERCITY EXP | MON | TUE | WED | THU | FRI | SAT | SUN | 2S | CC | 14:00 | DEST |
| 22653 | TVC NZM WKLY SF EXP | SAT | 3A | SL | 2A | 1A | 17:10 | 17:20 |
| 19261 | PORBANDAR EXP | SUN | SL | 3A | 04:05 | 04:15 |
| 19332 | INDB KCVL EXP | TUE | SL | 23:25 | 23:35 |
| 56966 | VSG QLM | MON | TUE | WED | THU | FRI | SAT | SUN | [] | 18:13 | 18:15 |
| 22414 | NZM MAO RAJDHANI EXPRESS | FRI | SAT | 2A | 3A | 14:20 | DEST |
| 16333 | VRL TVC EXPRESS | THU | 2A | SL | 07:25 | 07:35 |
| 16334 | VERAVAL EXPRESS | MON | 2A | SL | 3A | 11:20 | 11:30 |
| 16337 | OKHA ERS EXPRESS | MON | SAT | 3A | SL | 09:20 | 09:30 |
| 16345 | NETRAVATI EXP | MON | TUE | WED | THU | FRI | SAT | SUN | 3A | 2A | SL | 23:15 | 23:25 |
| 17420 | VSG TPTY | FRI | 2A | 3A | SL | 09:30 | 09:35 |
| 22629 | DADAR TEN EXP | FRI | 2A | SL | 08:25 | 08:35 |
| 22635 | MAQ INTERCITY EX | MON | TUE | WED | THU | FRI | SAT | SUN | CC | 2S | SOURCE | 16:00 |
| 22656 | NZM TVC WKLY SF EXP | FRI | 2A | 3A | SL | 1A | 18:40 | 18:50 |
| 22659 | KCVL DDN EXP | FRI | SL | 3A | 2A | 01:20 | 01:30 |
| 22660 | DDN KCVL SUP EXP | MON | 2A | SL | 3A | 21:00 | 21:10 |
| 12483 | KCVL EXPRESS | WED | SL | 2A | 3A | 02:10 | 02:20 |
| 22908 | HAPA MADGAON EXP | THU | SL | 05:00 | DEST |
| 50108 | MAO SWV PASSENGER | MON | TUE | WED | THU | FRI | SAT | SUN | [] | SOURCE | 06:15 |
| 56961 | QLM VSG | MON | TUE | WED | THU | FRI | SAT | SUN | [] | 07:28 | 07:30 |
| 56963 | QLM VSG PASSR | MON | TUE | WED | THU | FRI | SAT | SUN | [] | 13:10 | 13:15 |
| 16335 | NAGERCOIL EXP | FRI | SL | 3A | 2A | 09:20 | 09:30 |
| 17311 | CHENNAI VASCO EXP | FRI | 3A | 2A | SL | 11:55 | 12:00 |
| 12432 | NZM TVC RAJDHANI EXP | TUE | WED | SUN | 3A | 2A | 1A | 14:35 | 14:45 |