NAVAPUR railway station's abbreviated code is NWU. There are approximately 14 trains which depart or passes through NAVAPUR. Below you will see the list of trains with their arrival and departure timing from NAVAPUR.
| Train Number | Train Name | Run On | Classes | Schedule Arrival | Schedule Departure |
| 12833 | ADI HOWRAH EXPRESS | MON | TUE | WED | THU | FRI | SAT | SUN | 3A | 2A | SL | 06:18 | 06:23 |
| 12834 | HOWRAH AHMEDABAD EXPRESS | MON | TUE | WED | THU | FRI | SAT | SUN | 3A | 2A | SL | 06:23 | 06:28 |
| 69169 | ST NDB MEMU | MON | TUE | WED | THU | FRI | SAT | SUN | [] | 21:18 | 21:19 |
| 69170 | NDB ST MEMU | MON | TUE | WED | THU | FRI | SAT | SUN | [] | 04:18 | 04:20 |
| 22947 | ST BHAGALPUR EX | TUE | SAT | 3A | 11:25 | 11:27 |
| 22948 | BGP SURAT SF EXP | MON | THU | 3A | SL | 16:38 | 16:40 |
| 59075 | BHUSAVAL PASS | MON | TUE | WED | THU | FRI | SAT | SUN | SL | 10:31 | 10:33 |
| 59077 | BHUSAVAL PASS | MON | TUE | WED | THU | FRI | SAT | SUN | SL | 19:42 | 19:45 |
| 59013 | BHUSAVAL PASS | MON | TUE | WED | THU | FRI | SAT | SUN | SL | 01:56 | 01:58 |
| 19045 | TAPTI GANGA EXP | MON | WED | THU | FRI | SUN | 3A | SL | 11:25 | 11:27 |
| 59014 | SURAT PASSENGER | MON | TUE | WED | THU | FRI | SAT | SUN | SL | 00:15 | 00:22 |
| 59076 | BSL ST BCT PASS | MON | TUE | WED | THU | FRI | SAT | SUN | SL | 15:51 | 15:53 |
| 19046 | TAPTI GANGA EXP | TUE | WED | FRI | SAT | SUN | SL | 3A | 16:38 | 16:40 |
| 59078 | SURAT PASSENGER | MON | TUE | WED | THU | FRI | SAT | SUN | SL | 05:54 | 05:57 |